Allbwn Ymchwil fesul blwyddyn
Allbwn Ymchwil fesul blwyddyn
Proffil personol
Proffil
Jackie is a Sêr Cymru II Fellow working on big data stringology algorithms for bioinformatics sequencing.
Her research journey started with combinatorics of partially ordered sets which led to stringology algorithmics and topics in artificial intelligence. She’s been intrigued by lexicographic Lyndon words and the Burrows-Wheeler transform and has investigated variants derived from integrating these structures with different ordering and search methods.
The current focus is on applying this expertise to bioinformatics alignment and compression algorithms. The application of these techniques to infectious diseases is of particular interest.
Jackie’s teaching experience spans the USA, UK and Africa which was combined with career breaks for raising a family.
She is a member of The Institute of Mathematics and its Applications and the Women's Engineering Society, and participates in various research communities: StringMasters, AlgoUK, and the Centre for Combinatorics on Words and Applications.
Arbenigedd sy’n gysylltiedig â NDC y CU
Yn 2015, cytunodd gwladwriaethau sy’n aelodau'r Cenhedloedd Unedig ar 17 o Nodau Datblygu Cynaliadwy (NDC) byd-eang i ddod â thlodi i ben, diogelu’r blaned a sicrhau ffyniant i bawb. Mae gwaith y person hwn yn cyfrannu at y NDC canlynol:
Ôl bys
Ewch i ganol y pynciau ymchwil lle mae Jacqueline Daykin ar waith. Mae’r labelau pwnc hyn yn dod o waith y person hwn. Gyda’i gilydd maen nhw’n ffurfio ôl bys unigryw.
- 1 Proffiliau Tebyg
Rhwydwaith
Cydweithrediad allanol yn ddiweddar ar lefel gwlad/tiriogaeth. Plymiwch i mewn i'r manylion drwy glicio ar y dotiau neu
Allbwn ymchwil
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Computation of the suffix array, burrows-wheeler transform and FM-index in V-order
Daykin, J., Mhaskar, N. & Smyth, W. F., 03 Awst 2021, Yn: Theoretical Computer Science. 880, t. 82-96 15 t.Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid
Mynediad agoredFfeil14 Wedi eu Llwytho i Lawr (Pure) -
Concepts for Computing Patterns in 15th Century Korean Music
Moon, S., Daykin, J. & Pu, I., 24 Hyd 2020, PATTERNS 2020: The Twelfth International Conference on Pervasive Patterns and Applications. International Academy, Research, and Industry Association (IARIA), t. 6-11Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Trafodion Cynhadledd (Nid-Cyfnodolyn fathau)
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Evaluation of a Permutation-Based Evolutionary Framework for Lyndon Factorizations
Major, L., Clare, A., Daykin, J., Mora, B., Peña Gamboa, L. & Zarges, C., 31 Awst 2020, Parallel Problem Solving from Nature – PPSN XVI - 16th International Conference, PPSN 2020, Proceedings: 16th International Conference, Leiden, The Netherlands, September 5-9, 2020, Proceedings. Bäck, T., Preuss, M., Deutz, A., Emmerich, M., Wang, H., Doerr, C. & Trautmann, H. (gol.). Springer Nature, t. 390-403 14 t. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Cyfrol 12269 LNCS).Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Trafodion Cynhadledd (Nid-Cyfnodolyn fathau)
Mynediad agoredFfeil113 Wedi eu Llwytho i Lawr (Pure) -
On Arithmetically Progressed Suffix Arrays
Daykin, J., Köppl, D., Kübel, D. & Stober, F., 29 Meh 2020, (Accepted/In press) Stringology.Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Trafodion Cynhadledd (Nid-Cyfnodolyn fathau)
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PATTERNS 2020 The Twelfth International Conferences on Pervasive Patterns and Applications
Daykin, J. (gol.), 24 Hyd 2020, International Academy, Research, and Industry Association (IARIA). Mannaert, H., Pu, I. & Daykin, J. (gol.).Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Trafodion Cynhadledd (Nid-Cyfnodolyn fathau)
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Applications of V-Order: Suffix Arrays, the Burrows-Wheeler Transform & the FM-index
Alatabbi, A., Daykin, J. W., Mhaskar, N., Rahman, M. S. & Smyth, W. F., 16 Chwef 2019, WALCOM: Algorithms and Computation: 13th International Conference, WALCOM 2019, Guwahati, India, February 27 – March 2, 2019, Proceedings. Das, G. K., Mandal, P. S., Mukhopadhyaya, K. & Nakano, S. (gol.). Springer Nature, t. 329-338 10 t. (WALCOM: Algorithms and Computation; Rhif 13).Allbwn ymchwil: Pennod mewn Llyfr/Adroddiad/Trafodion Cynhadledd › Trafodion Cynhadledd (Nid-Cyfnodolyn fathau)
1 Dyfyniadau(SciVal) -
Efficient pattern matching in degenerate strings with the Burrows–Wheeler transform
Daykin, J., Groult, R., Guesnet, Y., Lecroq, T., Lefebvre, A., Léonard, M., Mouchard, L., Prieur-Gaston, É. & Watson, B., 15 Maw 2019, (E-gyhoeddi cyn argraffu) Yn: Information Processing Letters.Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid
Mynediad agoredFfeil4 Dyfyniadau(SciVal)83 Wedi eu Llwytho i Lawr (Pure) -
Enhanced string factoring from alphabet orderings
Clare, A. & Daykin, J. W., 01 Maw 2019, Yn: Information Processing Letters. 143, t. 4-7 4 t.Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid
Mynediad agoredFfeil4 Dyfyniadau(SciVal)158 Wedi eu Llwytho i Lawr (Pure) -
Evolutionary Search Techniques for the Lyndon Factorization of Biosequences
Clare, A., Daykin, J., Mills, T. & Zarges, C., 13 Gorff 2019, t. 1543-1550. 8 t.Allbwn ymchwil: Cyfraniad at gynhadledd › Papur › adolygiad gan gymheiriaid
Mynediad agoredFfeil5 Dyfyniadau(SciVal)249 Wedi eu Llwytho i Lawr (Pure) -
A Faster V-order String Comparison Algorithm
Alatabbi, A., Daykin, J. W., Mhaskar, N., Rahman, M. S. & Smyth, W. F., 2018, t. 38–49.Allbwn ymchwil: Cyfraniad at gynhadledd › Papur › adolygiad gan gymheiriaid
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Alphabet Reordering for the Lyndon Factorization of Biological Strings
Clare, A. & Daykin, J., 30 Awst 2018.Allbwn ymchwil: Cyfraniad at gynhadledd › Poster
Mynediad agored
Setiau Data Ymchwil
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Supporting Information for Evaluation of a Permutation-Based Evolutionary Framework for Lyndon Factorizations - Data
Major, L., Clare, A., Daykin, J., Mora, B., Peña Gamboa, L. & Zarges, C., Prifysgol Aberystwyth | Aberystwyth University, 05 Medi 2020
Dangosydd eitem ddigidol (DOI): 10.20391/e74e16cc-aa91-41b2-99d7-04465c23cf0a
Set ddata
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Supporting Information for Evaluation of a Permutation-Based Evolutionary Framework for Lyndon Factorizations - Code
Major, L., Clare, A., Daykin, J., Mora, B., Peña Gamboa, L. & Zarges, C., Prifysgol Aberystwyth | Aberystwyth University, 05 Medi 2020
Dangosydd eitem ddigidol (DOI): 10.5281/zenodo.3896389, https://github.com/jam86/Evaluation-of-a-Permutation-Based-Evolutionary-Framework-for-Lyndon-Factorizations
Set ddata
Gweithgareddau
- 1 Gweithgarwch golygyddol
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PATTERNS 2020The Twelfth International Conferences on Pervasive Patterns and Applications (Digwyddiad)
Herwig Mannaert (Golygydd), Ida Pu (Golygydd) & Jacqueline Daykin (Golygydd)
2020Gweithgaredd: Cyhoeddiad adolygiad cymheiriaid a gwaith golygyddol › Gweithgarwch golygyddol