Neidio i’r brif dudalen lywio Neidio i chwilio Neidio i’r prif gynnwys

Using reference-assisted chromosome assemblies to study chromosome structures and evolution in vertebrates

  • Larkin, Denis Mikhailovich (Arweinydd y Prosiect)

Prosiect: Ymchwil a ariannwyd yn allanol

Canlyniadau chwilio

  • 2023

    Fourth Report on Chicken Genes and Chromosomes 2022

    Smith, J., Alfieri, J. M., Anthony, N., Arensburger, P., Athrey, G. N., Balacco, J., Balic, A., Bardou, P., Barela, P., Bigot, Y., Blackmon, H., Borodin, P. M., Carroll, R., Casono, M. C., Charles, M., Cheng, H., Chiodi, M., Cigan, L., Coghill, L. M. & Crooijmans, R. & 104 eraill, Das, N., Davey, S., Davidian, A., Degalez, F., Dekkers, J. M., Derks, M., Diack, A. B., Djikeng, A., Drechsler, Y., Dyomin, A., Fedrigo, O., Fiddaman, S. R., Formenti, G., Frantz, L. A. F., Fulton, J. E., Gaginskaya, E., Galkina, S., Gallardo, R. A., Geibel, J., Gheyas, A. A., Godinez, C. J. P., Goodell, A., Graves, J. A. M., Griffin, D. K., Haase, B., Han, J.-L., Hanotte, O., Henderson, L. J., Hou, Z.-C., Howe, K., Huynh, L., Ilatsia, E., Jarvis, E. D., Johnson, S. M., Kaufman, J., Kelly, T., Kemp, S., Kern, C., Keroack, J. H., Klopp, C., Lagarrigue, S., Lamont, S. J., Lange, M., Lanke, A., Larkin, D. M., Larson, G., Layos, J. K. N., Lebrasseur, O., Malinovskaya, L. P., Martin, R. J., Martin Cerezo, M. L., Mason, A. S., McCarthy, F. M., McGrew, M. J., Mountcastle, J., Muhonja, C. K., Muir, W., Muret, K., Murphy, T. D., Ng’ang’a, I., Nishibori, M., O’Connor, R. E., Ogugo, M., Okimoto, R., Ouko, O., Patel, H. R., Perini, F., Pigozzi, M. I., Potter, K. C., Price, P. D., Reimer, C., Rice, E. S., Rocos, N., Rogers, T. F., Saelao, P., Schauer, J., Schnabel, R. D., Schneider, V. A., Simianer, H., Smith, A., Stevens, M. P., Stiers, K., Tiambo, C. K., Tixier-Boichard, M., Torgasheva, A. A., Tracey, A., Tregaskes, C. A., Vervelde, L., Wang, Y., Warren, W. C., Waters, P. D., Webb, D., Weigend, S., Wolc, A., Wright, A. E., Wright, D., Wu, Z., Yamagata, M., Yang, C., Yin, Z.-T., Young, M. C., Zhang, G., Zhao, B. & Zhou, H., 01 Gorff 2023, Yn: Cytogenetic and Genome Research. 162, 8-9, t. 405-528 124 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    41 Dyfyniadau (Scopus)
    1 Wedi eu Llwytho i Lawr (Pure)

  • 2019

    Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks

    Farré, M., Kim, J., Proskuryakova, A. A., Zhang, Y., Kulemzina, A. I., Li, Q., Zhou, Y., Xiong, Y., Johnson, J. L., Perelman, P. L., Johnson, W. E., Warren, W. C., Kukekova, A. V., Zhang, G., O'Brien, S. J., Ryder, O. A., Graphodatsky, A. S., Ma, J., Lewin, H. A. & Larkin, D. M., Ebr 2019, Yn: Genome Research. 29, 4, t. 576-589 14 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    40 Dyfyniadau (Scopus)
    270 Wedi eu Llwytho i Lawr (Pure)

  • 2018

    Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes

    O'Connor, R. E., Farré, M., Joseph, S., Damas, J., Kiazim, L., Jennings, R., Bennett, S., Slack, E. A., Allanson, E., Larkin, D. M. & Griffin, D. K., 24 Hyd 2018, Yn: Genome Biology. 19, 1, 171.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    55 Dyfyniadau (Scopus)
    226 Wedi eu Llwytho i Lawr (Pure)

  • Chromosome Level Genome Assembly and Comparative Genomics between Three Falcon Species Reveals an Unusual Pattern of Genome Organisation

    Joseph, S., O’Connor, R., Al Mutery, A., Watson, M., Larkin, D. & Griffin, D., 18 Hyd 2018, Yn: Diversity. 10, 4, 113.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    31 Dyfyniadau (Scopus)

  • Construction of Red Fox Chromosomal Fragments from the Short-Read Genome Assembly

    Rando, H. M., Farré, M., Robson, M. P., Won, N. B., Johnson, J. L., Buch, R., Bastounes, E. R., Xiang, X., Feng, S., Liu, S., Xiong, Z., Kim, J., Zhang, G., Trut, L. N., Larkin, D. M. & Kukekova, A. V., 20 Meh 2018, Yn: Genes. 9, 6, 308.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    11 Dyfyniadau (Scopus)
    206 Wedi eu Llwytho i Lawr (Pure)

  • Reconstruction of avian ancestral karyotypes reveals differences in the evolutionary history of macro- and microchromosomes

    Damas, J., Kim, J., Farré, M., Griffin, D. K. & Larkin, D. M., 05 Hyd 2018, Yn: Genome Biology. 19, 1, 155.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    50 Dyfyniadau (Scopus)
    198 Wedi eu Llwytho i Lawr (Pure)

  • Reconstruction of the diapsid ancestral genome permits chromosome evolution tracing in avian and non-avian dinosaurs

    O'Connor, R. E., Romanov, M. N., Kiazim, L. G., Barrett, P. M., Farré, M., Damas, J., Ferguson-Smith, M., Valenzuela, N., Larkin, D. M. & Griffin, D. K., 21 Mai 2018, Yn: Nature Communications. 9, 1883.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    66 Dyfyniadau (Scopus)
    271 Wedi eu Llwytho i Lawr (Pure)

  • 2017

    Upgrading short read animal genome assemblies to chromosome level using comparative genomics and a universal probe set

    Damas, J., O'Connor, R., Farré, M., Lenis, V., Martell, H., Mandawala, A., Fowler, K., Joseph, S., Swain, M., Griffin, D. & Larkin, D. M., 01 Mai 2017, Yn: Genome Research. 27, 5, t. 875-884 10 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    84 Dyfyniadau (Scopus)
    206 Wedi eu Llwytho i Lawr (Pure)

  • 2016

    Novel insights into chromosome evolution in birds, archosaurs, and reptiles

    Farré, M., Narayan, J., Slavov, G., Damas, J., Auvil, L., Li, C., Jarvis, E. D., Burt, D. W., Griffin, D. K. & Larkin, D. M., 25 Awst 2016, Yn: Genome Biology and Evolution. 8, 8, t. 2442-2451 10 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    56 Dyfyniadau (Scopus)
    211 Wedi eu Llwytho i Lawr (Pure)

  • 2015

    Population structure and history of the Welsh sheep breeds determined by whole genome genotyping

    Beynon, S. E., Slavov, G. T., Farré-Belmonte, M., Sunduimijid, B., Waddams, K., Davies, B., Haresign, W., Kijas, J., Macleod, I. M., Newbold, C. J., Davies, L. & Larkin, D. M., 20 Meh 2015, Yn: BMC Genetics. 16, 1, 65.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    68 Dyfyniadau (Scopus)
    883 Wedi eu Llwytho i Lawr (Pure)

  • 2014

    Comparative genomics reveals insights into avian genome evolution and adaptation

    Zhang, G., Li, C., Li, Q., Li, B., Larkin, D. M., Lee, C., Storz, J. F., Antunes, A., Greenwold, M. J., Meredith, R. W., Ödeen, A., Cui, J., Zhou, Q., Xu, L., Pan, H., Wang, Z., Jin, L., Zhang, P., Hu, H. & Yang, W. & 85 eraill, Hu, J., Xiao, J., Yang, Z., Liu, Y., Xie, Q., Yu, H., Lian, J., Wen, P., Zhang, F., Li, H., Zeng, Y., Xiong, Z., Liu, S., Zhou, L., Huang, Z., An, N., Wang, J., Zheng, Q., Xiong, Y., Wang, G., Wang, B., Wang, J., Fan, Y., da Fonseca, R. R., Alfaro-Núñez, A., Schubert, M., Orlando, L., Mourier, T., Howard, J. T., Ganapathy, G., Pfenning, A., Whitney, O., Rivas, M. V., Hara, E., Smith, J., Farré-Belmonte, M., Narayan, J., Slavov, G., Romanov, M. N., Borges, R., Machado, J. P., Khan, I., Springer, M. S., Gatesy, J., Hoffmann, F. G., Opazo, J. C., Håstad, O., Sawyer, R. H., Kim, H., Kim, K.-W., Kim, H. J., Cho, S., Li, N., Huang, Y., Bruford, M. W., Zhan, X., Dixon, A., Bertelsen, M. F., Derryberry, E., Warren, W., Wilson, R. K., Li, S., Ray, D. A., Green, R. E., O'Brien, S. J., Griffin, D., Johnson, W. E., Haussler, D., Ryder, O. A., Willerslev, E., Graves, G. R., Alstrom, P., Fjeldsa, J., Mindell, D. P., Edwards, S. V., Braun, E. L., Rahbek, C., Burt, D. W., Houde, P., Zhang, Y., Yang, H., Wang, J., Jarvis, E. D., Gilbert, M. T. P. & Wang, J., 12 Rhag 2014, Yn: Science. 346, 6215, t. 1311-1320 10 t.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    838 Dyfyniadau (Scopus)
    473 Wedi eu Llwytho i Lawr (Pure)

  • Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax

    Fang, X., Nevo, E., Han, L., Levanon, E. Y., Zhao, J., Avivi, A., Larkin, D., Jiang, X., Feranchuk, S., Zhu, Y., Fishman, A., Feng, Y., Sher, N., Xiong, Z., Hankeln, T., Huang, Z., Gorbunova, V., Zhang, L., Zhao, W. & Wildman, D. E. & 33 eraill, Xiong, Y., Gudkov, A., Zheng, Q., Rechavi, G., Liu, S., Bazak, L., Chen, J., Knisbacher, B. A., Lu, Y., Shams, I., Gajda, K. P., Farré-Belmonte, M., Kim, J., Lewin, H. A., Ma, J., Band, M., Bicker, A., Kranz, A., Mattheus, T., Schmidt, H., Seluanov, A., Azpurua, J., Mcgowen, M. R., Ben Jacob, E., Li, K., Peng, S., Zhu, X., Liao, X., Li, S., Krogh, A., Zhou, X., Brodsky, L. & Wang, J., 03 Meh 2014, Yn: Nature Communications. 5, 3966.

    Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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    132 Dyfyniadau (Scopus)