Before you go: A packing list for portable DNA sequencing of microbiomes and metagenomes

Arwyn Edwards; André Soares; Aliyah Debbonaire; Sara Maria Edwards Rassner

doi:10.1099/mic.0.001220

Before you go: A packing list for portable DNA sequencing of microbiomes and metagenomes

Arwyn Edwards^*, André Soares, Aliyah Debbonaire, Sara Maria Edwards Rassner

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Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

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This article is being drafted as we pack our genomics kit for our first polar fieldwork since the COVID-19 pandemic began. Nanopore sequencing has certainly proven itself as a disruptive technology during the pandemic, tracking the spread of SARS-CoV-2 (e.g. [1]). However, for microbiologists using nanopore sequencing for its portability, the pandemic has often disrupted their field plans. In this article, we share some reflections from exploits during the pre-pandemic era of portable sequencing. Hopefully these considerations are helpful for others seeking to take DNA sequencing where genomics has never ventured before.

Iaith wreiddiol	Saesneg
Rhif yr erthygl	001220
Nifer y tudalennau	4
Cyfnodolyn	Microbiology (United Kingdom)
Cyfrol	168
Rhif cyhoeddi	7
Dynodwyr Gwrthrych Digidol (DOIs)	https://doi.org/10.1099/mic.0.001220
Statws	Cyhoeddwyd - 08 Gorff 2022

Mynediad at Ddogfen

10.1099/mic.0.001220Trwydded: CC BY

ArticleFersiwn derfynol wedi’i chyhoeddi, 999 KBTrwydded: CC BY

Cysylltiad parhaol

Dolen barhaus

Ffeiliau eraill a chysylltiadau

Dolen i’r cyhoeddiad yn Scopus

2 Wedi Gorffen

How will glacial meltwater microbes come in from the cold in this 'Peak Melt' century - IBERS
Edwards, A., Morphew, R. & Mur, L.
Natural Environment Research Council
01 Rhag 2018 → 31 Mai 2022
Prosiect: Ymchwil a ariannwyd yn allanol
How will glacial meltwater microbes come in from the cold in this 'Peak Melt' century - DGES
Irvine-Fynn, T., Mitchell, A., Cook, J. & Edwards Rassner, S. M.
Natural Environment Research Council
01 Rhag 2018 → 31 Mai 2022
Prosiect: Ymchwil a ariannwyd yn allanol

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AB - This article is being drafted as we pack our genomics kit for our first polar fieldwork since the COVID-19 pandemic began. Nanopore sequencing has certainly proven itself as a disruptive technology during the pandemic, tracking the spread of SARS-CoV-2 (e.g. [1]). However, for microbiologists using nanopore sequencing for its portability, the pandemic has often disrupted their field plans. In this article, we share some reflections from exploits during the pre-pandemic era of portable sequencing. Hopefully these considerations are helpful for others seeking to take DNA sequencing where genomics has never ventured before.

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Before you go: A packing list for portable DNA sequencing of microbiomes and metagenomes

Crynodeb

Mynediad at Ddogfen

Cysylltiad parhaol

Ffeiliau eraill a chysylltiadau

Ôl bys

Prosiectau

How will glacial meltwater microbes come in from the cold in this 'Peak Melt' century - IBERS

How will glacial meltwater microbes come in from the cold in this 'Peak Melt' century - DGES

Dyfynnu hyn