Prosiectau fesul blwyddyn
Crynodeb
V-order is a total order on strings that determines an instance of Unique Maximal Factorization Families (UMFFs), a generalization of Lyndon words. The fundamental V-comparison of strings can be done in linear time and constant space. V-order has been proposed as an alternative to lexicographic order (lexorder) in the computation of suffix arrays and in the suffix-sorting induced by the Burrows-Wheeler transform (BWT). In line with the recent interest in the connection between suffix arrays and Lyndon factorization, in this paper we obtain similar results for the V-order factorization. Indeed, we show that the results describing the connection between suffix arrays and Lyndon factorization are matched by analogous V-order processing. We also describe a methodology for efficiently computing the FM-Index in V-order, as well as V-order substring pattern matching using backward search.
Iaith wreiddiol | Saesneg |
---|---|
Tudalennau (o-i) | 82-96 |
Nifer y tudalennau | 15 |
Cyfnodolyn | Theoretical Computer Science |
Cyfrol | 880 |
Dyddiad ar-lein cynnar | 21 Gorff 2021 |
Dynodwyr Gwrthrych Digidol (DOIs) | |
Statws | Cyhoeddwyd - 03 Awst 2021 |
Ôl bys
Gweld gwybodaeth am bynciau ymchwil 'Computation of the suffix array, burrows-wheeler transform and FM-index in V-order'. Gyda’i gilydd, maen nhw’n ffurfio ôl bys unigryw.Prosiectau
- 1 Wedi Gorffen
-
SeqInfo : Big Data Stringology Algorithms for 2nd and 3rd Generation Sequencing - Dr Jacqueline Daykin - EU/WG
Clare, A. (Prif Ymchwilydd)
15 Ion 2018 → 07 Ion 2021
Prosiect: Ymchwil a ariannwyd yn allanol