Goldilocks: A tool for identifying genomic regions that are ‘just right’

Samuel M. Nicholls, Amanda Clare, Joshua Randall

Allbwn ymchwil: Cyfraniad at gyfnodolynErthygladolygiad gan gymheiriaid

1 Dyfyniadau(SciVal)
136 Wedi eu Llwytho i Lawr (Pure)

Crynodeb

Summary: We present Goldilocks: a Python package providing functionality for collecting summary statistics, identifying shifts in variation, discovering outlier regions and locating and extracting interesting regions from one or more arbitrary genomes for further analysis, for a user-provided definition of interesting.

Availability and implementation: Goldilocks is freely available open-source software distributed under the MIT licence. Source code is hosted publicly at https://github.com/SamStudio8/goldilocks and the package may also be installed using pip install goldilocks. Documentation can be found at https://goldilocks.readthedocs.org.

Contact: msn@aber.ac.uk

Supplementary information: Supplementary data are available at Bioinformatics online.
Iaith wreiddiolSaesneg
Tudalennau (o-i)2047-2049
Nifer y tudalennau3
CyfnodolynBioinformatics
Cyfrol32
Rhif cyhoeddi13
Dyddiad ar-lein cynnar07 Maw 2016
Dynodwyr Gwrthrych Digidol (DOIs)
StatwsCyhoeddwyd - 01 Gorff 2016

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