Metaphylogenomic and Potential Functionality of the Limpet Patella pellucida’s Gastrointestinal Tract Microbiome

Magda Dudek; Jessica Adams; Martin Swain; Matthew Hegarty; Sharon Huws; Joe Gallagher

doi:10.3390/ijms151018819

Metaphylogenomic and Potential Functionality of the Limpet Patella pellucida’s Gastrointestinal Tract Microbiome

Magda Dudek, Jessica Adams, Martin Swain, Matthew Hegarty, Sharon Huws, Joe Gallagher

Adran y Gwyddorau Bywyd

Allbwn ymchwil: Cyfraniad at gyfnodolyn › Erthygl › adolygiad gan gymheiriaid

13 Dyfyniadau (Scopus)

174 Wedi eu Llwytho i Lawr (Pure)

Crynodeb

This study investigated the microbial diversity associated with the digestive tract of the seaweed grazing marine limpet Patella pellucida. Using a modified indirect DNA extraction protocol and performing metagenomic profiling based on specific prokaryotic marker genes, the abundance of bacterial groups was identified from the analyzed metagenome. The members of three significantly abundant phyla of Proteobacteria, Firmicutes and Bacteroidetes were characterized through the literature and their predicted functions towards the host, as well as potential applications in the industrial environment assessed.

Iaith wreiddiol	Saesneg
Tudalennau (o-i)	18819-18839
Cyfnodolyn	International Journal of Molecular Sciences
Cyfrol	15
Rhif cyhoeddi	10
Dynodwyr Gwrthrych Digidol (DOIs)	https://doi.org/10.3390/ijms151018819
Statws	Cyhoeddwyd - 20 Hyd 2014

NDC y CU

Mae’r allbwn hwn yn cyfrannu at y Nod(au) Datblygu Cynaliadwy canlynol

Mynediad at Ddogfen

10.3390/ijms151018819

Metaphylogenomic and potential functionality of the limpet Patella pellucida's gastrointestinal tract microbiomeFersiwn derfynol wedi’i chyhoeddi, 833 KB

Cysylltiad parhaol

Dolen barhaus

Ffeiliau eraill a chysylltiadau

http://hdl.handle.net/2160/27116

Jessica Adams
- jaaaber.acuk
- Athrofa y Gwyddorau Biolegol, Amgylcheddol a Gwledig - Research Fellow
Unigolyn: Ymchwil

1 Wedi Gorffen

Characterisation and exploitation of novel antimicrobials within the rumen microbiota
Huws, S. (Prif Ymchwilydd), Creevey, C. (Cyd-ymchwilydd), Kingston-Smith, A. (Cyd-ymchwilydd), McEwan, N. (Cyd-ymchwilydd) & Newbold, J. (Cyd-ymchwilydd)
Biotechnology and Biological Sciences Research Council
01 Ebr 2014 → 31 Maw 2018
Prosiect: Ymchwil a ariannwyd yn allanol

Dyfynnu hyn

@article{41a52ece8b1f48ed9923af7482affab7,

title = "Metaphylogenomic and Potential Functionality of the Limpet Patella pellucida{\textquoteright}s Gastrointestinal Tract Microbiome",

abstract = "This study investigated the microbial diversity associated with the digestive tract of the seaweed grazing marine limpet Patella pellucida. Using a modified indirect DNA extraction protocol and performing metagenomic profiling based on specific prokaryotic marker genes, the abundance of bacterial groups was identified from the analyzed metagenome. The members of three significantly abundant phyla of Proteobacteria, Firmicutes and Bacteroidetes were characterized through the literature and their predicted functions towards the host, as well as potential applications in the industrial environment assessed.",

keywords = "Patella pellucida, limpet, mollusc, symbiosis metagenomics, bioenergy, biorefining, seaweed, macroalgae",

author = "Magda Dudek and Jessica Adams and Martin Swain and Matthew Hegarty and Sharon Huws and Joe Gallagher",

year = "2014",

month = oct,

day = "20",

doi = "10.3390/ijms151018819",

language = "English",

volume = "15",

pages = "18819--18839",

journal = "International Journal of Molecular Sciences",

issn = "1422-0067",

publisher = "Multidisciplinary Digital Publishing Institute",

number = "10",

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TY - JOUR

T1 - Metaphylogenomic and Potential Functionality of the Limpet Patella pellucida’s Gastrointestinal Tract Microbiome

AU - Dudek, Magda

AU - Adams, Jessica

AU - Swain, Martin

AU - Hegarty, Matthew

AU - Huws, Sharon

AU - Gallagher, Joe

PY - 2014/10/20

Y1 - 2014/10/20

N2 - This study investigated the microbial diversity associated with the digestive tract of the seaweed grazing marine limpet Patella pellucida. Using a modified indirect DNA extraction protocol and performing metagenomic profiling based on specific prokaryotic marker genes, the abundance of bacterial groups was identified from the analyzed metagenome. The members of three significantly abundant phyla of Proteobacteria, Firmicutes and Bacteroidetes were characterized through the literature and their predicted functions towards the host, as well as potential applications in the industrial environment assessed.

AB - This study investigated the microbial diversity associated with the digestive tract of the seaweed grazing marine limpet Patella pellucida. Using a modified indirect DNA extraction protocol and performing metagenomic profiling based on specific prokaryotic marker genes, the abundance of bacterial groups was identified from the analyzed metagenome. The members of three significantly abundant phyla of Proteobacteria, Firmicutes and Bacteroidetes were characterized through the literature and their predicted functions towards the host, as well as potential applications in the industrial environment assessed.

KW - Patella pellucida

KW - limpet

KW - mollusc

KW - symbiosis metagenomics

KW - bioenergy

KW - biorefining

KW - seaweed

KW - macroalgae

UR - http://hdl.handle.net/2160/27116

U2 - 10.3390/ijms151018819

DO - 10.3390/ijms151018819

M3 - Article

C2 - 25334059

SN - 1422-0067

VL - 15

SP - 18819

EP - 18839

JO - International Journal of Molecular Sciences

JF - International Journal of Molecular Sciences

IS - 10

ER -

Metaphylogenomic and Potential Functionality of the Limpet Patella pellucida’s Gastrointestinal Tract Microbiome

Crynodeb

NDC y CU

Mynediad at Ddogfen

Cysylltiad parhaol

Ffeiliau eraill a chysylltiadau

Ôl bys

Proffiliau

Jessica Adams

Prosiectau

Characterisation and exploitation of novel antimicrobials within the rumen microbiota

Dyfynnu hyn