Personal profile
Profile
My research is focused on developing climate-resilient and nutritionally enriched cereals using multi-omics approaches. I have expertise in metabolomics, molecular biology, protein expression, and biochemistry. I completed my PhD in Plant Biotechnology at Kerala University, India, on Type III polyketide synthases in Indian Gooseberry, followed by postdoctoral research at MIGAL, Israel, studying methionine metabolism in Arabidopsis. In 2020, I was awarded the Marie Skłodowska-Curie Individual Fellowship (SUPERTEFF) to advance the Ethiopian gluten-free cereal Tef, applying metabolomics to assess nutritional diversity and drought-adaptive traits, and developing tissue culture and gene-editing pipelines. I am passionate about applying fundamental plant science to improve understudied cereals such as oats and tef, supporting sustainable agriculture and global food security.
Additional information
Interested in plants stress adaptation and nutrition?
Undergraduate and Master student projects.
Enthusiastic students are welcome to carry out projects for a final year project or summer internship. I have lots of project ideas that can be tailored based on your interests. Please get in touch.
Looking for PhD or Post-Doc fellowships?
I am looking for people who have a passion for understanding plant development under stress environment and also on exploring nutrient rich gluten free crops like oats and teff. If you are interested in applying for a PhD or Post - Doc fellowship with me, send a CV and a cover letter explaining why you are interested and what you would like to study. I will get in touch to discuss the possible opportunities and funding options.
Research interests
How ‘omics’ approaches can be used to breed climate resilient and nutrient rich crops?
Unpredictable climate changes impose stress in crops that can dynamically regulate various molecular events. I am interested to track the stress adaptive mechanism using ‘multi-omics’ strategies (phenomics, transcriptomics and metabolomics) in elucidating the metabolite-gene regulatory nodes that can confer stress resilience during different growth stages (grain filling, seedling).
Mapping the unknown fate of stress to future generations. Plants can sense and remember the changes that occur in their environment. This memory is linked to the “epi-genome”. These epigenetic changes represent a “stress memory” which can be “forgotten” but can be reimposed by “reminders”. These reminders can be renewed by “priming” by physical and chemical processes. Priming events will induce the plant immune memory by reiterating key epigenetic modifications. These changes are not fully understood but represents an opportunity for a new approach to sustainable crop protection. My research focuses on identifying stress memory networks and epialleles that are associated with stress memory. Crucially, priming is a feasible and cost-effective strategy to enhance stress tolerance that could be readily exploited.
Alternative functional grains. With the increase in lifestyle diseases like diabetes, cholesterol and rise in the consumption of more vegan food there is a demand for new functional plant-based foods. Over the last century research has been pioneered over the major crops, wheat and rice. Cumulatively, minor crops play important roles in global food security. Two such promising cereals are oats and tef. Oats are rich in dietary fibre like high glucan, calcium, oil, protein and antioxidants. Tef is a tiny sized gluten free grain from Ethiopia with high level of iron, calcium and protein. Sourdough fermentation is an emerging technology, and I am interested to identify the application of sourdough technology in developing functional plant-based foods.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 2 Zero Hunger
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SDG 3 Good Health and Well-being
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SDG 13 Climate Action
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Collaborations and top research areas from the last five years
Profiles
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Hardik Harishchandra Patel
Person: Doctor of Philosophy
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Tef: A tiny grain with enormous potential
Girija, A., Jifar, H., Jones, C., Yadav, R., Doonan, J. & Mur, L. A. J., 01 Mar 2022, In: Trends in Plant Science. 27, 3, p. 220-223 4 p.Research output: Contribution to journal › Comment/Debate › peer-review
Open AccessFile16 Citations (Scopus)231 Downloads (Pure) -
Untargeted Metabolomic Profiling Reveals Variation in Metabolites Associated with Nutritional Values in Tef Accessions
Girija, A., Yadav, R., Corke, F., Doonan, J. & Mur, L. A. J., 01 Dec 2021, In: Plant Foods for Human Nutrition. 76, 4, p. 536-539 4 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)147 Downloads (Pure) -
Elucidating drought responsive networks in tef (Eragrostis tef) using phenomic and metabolomic approaches
Girija, A., Han, J., Corke, F., Doonan, J., Yadav, R., Brook, J., Jifar, H. & Mur, L., 10 Jan 2022, In: Physiologia Plantarum. 174, 1, 12 p., e13597.Research output: Contribution to journal › Article › peer-review
Open AccessFile15 Citations (Scopus)291 Downloads (Pure) -
The Level of Methionine Residues in Storage Proteins Is the Main Limiting Factor of Protein-Bound-Methionine Accumulation in Arabidopsis Seeds
Girija, A., Shotan, D., Hacham, Y. & Amir, R., 05 Aug 2020, In: Frontiers in Plant Science. 11, 15 p., 1136.Research output: Contribution to journal › Article › peer-review
Open AccessFile8 Citations (Scopus)81 Downloads (Pure) -
Molecular and microstructural cues for starch digestive heterogeneity in Indian pearl millet (Pennisetum Glaucum)
Pandey, S. (Lead Author), Goswami, D., Vinutha, T., Kumar, R. R., Singh, S. P., Rudra, S. G., Singh, M. K., Satyavathi, T., Girija, A., Thandapilly, S. J. & Krishnan, V., 17 Feb 2026, In: Journal of Functional Foods. 138, 13 p., 107208.Research output: Contribution to journal › Article › peer-review
Open AccessFile1 Downloads (Pure) -
Breeding Climate-Resilient Varieties: Focus on Cereals and Pulses for Future Food Security
Girija, A., Aswathi, U. & Kattupalli, D., 08 Oct 2025, Plant Breeding 2050. Priyadarshan, P. M. & Ortiz, R. (eds.). Springer Nature, p. 105-135 31 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
1 Citation (Scopus) -
Chain Length and Degree of Saturation of Cooking Fats Influence the Inherent Glycemic Potential of Dietary Starches
Mondal, D., Thakare, S. S., Bollinedi, H., Aggarwal, S., Das, D., Thomas, B., Singh, S. P., Sathyavathi, T., Sundaram, R. M., Anand, A., Girija, A., Singh, A., Sachdev, A., Praveen, S., Singh, A. K. & Krishnan, V., 15 May 2025, In: Starch/Staerke. 77, 5, 13 p., e70010.Research output: Contribution to journal › Article › peer-review
Open AccessFile27 Downloads (Pure) -
Health benefits of ethnic fermented foods
Santa, D., Huch, M., Stoll, D. A., Cunedioglu, H., Priidik, R., Karakaş-Budak, B., Matalas, A., Pennone, V., Girija, A., Arranz, E., Syrpas, M., Mukherjee, A., Cotter, P. D., Mojsova, S., Chassard, C., Praćer, S., Vergères, G. & Kütt, M.-L., 26 Sept 2025, (E-pub ahead of print) In: Frontiers in Nutrition. 12, 21 p., 1677478.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Citations (Scopus)78 Downloads (Pure) -
Metabolomic approaches suggest two mechanisms of drought response post-anthesis in Mediterranean oat (Avena sativa L.) cultivars
Girija, A., Canales, F. J., Haddadi, B. S., Dye, R., Corke, F., Williams, K., Phillips, H., Beckmann, M., Prats, E., Doonan, J. H. & Mur, L. A. J., 27 Mar 2025, In: Physiologia Plantarum. 177, 2, 16 p., e70181.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)116 Downloads (Pure) -
Population genomics uncovers loci for trait improvement in the indigenous African cereal tef (Eragrostis tef)
Jones, M. R. W., Kebede, W., Teshome, A., Girija, A., Teshome, A., Girma, D., Brown, J. K. M., Quiroz-Chavez, J., Jones, C. S., Wulff, B. B. H., Assefa, K., Tadele, Z., Mur, L. A. J., Chanyalew, S., Uauy, C. & Shorinola, O., 26 May 2025, In: Communications Biology. 8, 1, p. 807 15 p., 807.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)8 Downloads (Pure)
Projects
- 4 Finished
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DeepDetect: DeepDetect: Developing an Image-based mobile diagnosis application for Early Disease Detection in potato farming
Akpokodje, E. (Project Lead), Girija, A. (Project Co‑Lead), Rajapaksha, P. (Project Co‑Lead), Girija, A. (Researcher Co‑Lead) & Roberts, L. (Research and Innovation Associate)
Llywodraeth Cymru | Welsh Government
16 Jun 2025 → 31 Jan 2026
Project: Externally funded research
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Developing Nutrient-Rich, Sustainable and Resilient Food Systems using minor cereals.
Girija, A. (Project Lead)
The Joy Welch Educational Charitable Trust
01 Oct 2024 → 30 Sept 2025
Project: Internally funded research
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BBSRC International Institutional Awards Tranche 1 IBERS
Bryant, D. (Project Lead), Adams, J. (Project Co‑Lead), Ifie, B. (Project Co‑Lead), Rees, H. (Project Co‑Lead), Girija, A. (Researcher Co‑Lead), Hammond, D. (Research and Innovation Associate), Hughes, A. (Research and Innovation Associate), Roberts, L. (Research and Innovation Associate), Warren-Walker, D. (Research and Innovation Associate), Jones, S. (Technician), Thomas, D. (Technician), Tudor, S. (Technician), Wyn-Jones, D. P. (Technician) & McGowan, S. (Professional Enabling Staff)
Biotechnology and Biological Sciences Research Council
08 Jan 2024 → 30 Jun 2024
Project: Externally funded research
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SUPERTEFF
Mur, L. (Project Lead), Girija, A. (Researcher Co‑Lead) & Yadav, R. (Researcher Co‑Lead)
Horizon Discovery (United Kingdom)
25 Mar 2020 → 24 Jan 2023
Project: Externally funded research
Press/Media
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Orphan Crop Status Rises To 'Super Grain'
17 Aug 2021
1 item of Media coverage
Press/Media: Media coverage
Activities
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Sprouting for biofortification of cereal based foods
Girija, A. (Speaker)
07 Apr 2025 → 10 Apr 2025Activity: Talk or presentation › Oral presentation
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Sprouting, a feasible strategy to improve the nutraceutical potential of cereals
Girija, A. (Speaker)
17 Sept 2024 → 18 Sept 2024Activity: Talk or presentation › Oral presentation
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NeoPhotonics (United States) (External organisation)
Girija, A. (Member)
01 Apr 2024Activity: Membership › Membership of committee
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EMBO Practical Course Hands-on course in genome sequencing, assembly, and downstream analyses
Girija, A. (Participant)
28 Jan 2024 → 03 Feb 2024Activity: Participating in or organising an event › Workshop, Seminar, or Course
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Oats: a promising multifunctional grain for future functional foods
Girija, A. (Speaker)
20 Mar 2023 → 23 Mar 2023Activity: Talk or presentation › Oral presentation
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Rank Prize Fund symposium on "Emerging opportunities and challenges for utilising bioactives from oats" Grassmere.
Howarth, C. (Speaker), Griffiths, I. (Speaker), Loosley, R. M. (Speaker), Tudor, S. E. (Speaker), Davies, J. (Speaker) & Girija, A. (Speaker)
2023Activity: Talk or presentation › Oral presentation
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A forgotten grain from Ethiopia, Tef
Girija, A. (Speaker)
04 Apr 2022 → 06 Apr 2022Activity: Talk or presentation › Oral presentation
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SOWING NEW SEEDS FOR SHAPING A SUSTAINABLE FOOD FUTURE: METABOLOMICS TO CRISPR
Girija, A. (Speaker)
17 Mar 2021Activity: Talk or presentation › Invited talk
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“Enhancing the Value of Orphan Crops in Shaping a Sustainable Food Future: 'Teff' A New Super Grain”
Girija, A. (Speaker)
04 Nov 2020Activity: Talk or presentation › Invited talk