Research output per year
Research output per year
- 25 results
Search results
-
2022
Molecular and physiological responses to desiccation indicate the abscisic acid pathway is conserved in the peat moss, Sphagnum
Nibau, C., Van De Koot, W., Spiliotis, D., Williams, K., Kramaric, T., Beckmann, M., Mur, L., Hiwatashi, Y. & Doonan, J. H., 16 Jul 2022, In: Journal of Experimental Botany. 73, 13, p. 4576-4591 16 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile8 Citations (Scopus)113 Downloads (Pure) -
2021
A Comparison of Differential Gene Expression in Response to the Onset of Water Stress Between Three Hybrid Brachiaria Genotypes
Jones, C., De Vega, J., Worthington, M., Thomas, A., Gasior, D., Harper, J., Doonan, J., Fu, Y., Bosch, M., Corke, F., Arango, J., Cardoso, J. A., de la Cruz Jimenez, J., Armstead, I. & Fernandez-Fuentes, N., 19 Mar 2021, In: Frontiers in Plant Science. 12, 16 p., 637956.Research output: Contribution to journal › Article › peer-review
Open AccessFile8 Citations (Scopus)124 Downloads (Pure) -
Deep Segmentation of Point Clouds of Wheat
Ghahremani, M., Williams, K., Corke, F. M. K., Tiddeman, B., Liu, Y. & Doonan, J. H., 24 Mar 2021, In: Frontiers in Plant Science. 12, 15 p., 608732.Research output: Contribution to journal › Article › peer-review
Open AccessFile30 Citations (Scopus)154 Downloads (Pure) -
Development of an Image Analysis Pipeline to Estimate Sphagnum Colony Density in the Field
van de Koot, W., van Vliet, L., Chen, W., Doonan, J. & Nobre Nibau, C., 22 Apr 2021, In: Plants. 10, 5, 17 p., 840.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Citations (Scopus)131 Downloads (Pure) -
FFD: Fast Feature Detector
Ghahremani, M., Liu, Y. & Tiddeman, B., 2021, In: IEEE Transactions on Image Processing. 30, p. 1153-1168 16 p., 9292438.Research output: Contribution to journal › Article › peer-review
Open AccessFile26 Citations (Scopus)102 Downloads (Pure) -
KnetMiner: A comprehensive approach for supporting evidence-based gene discovery and complex trait analysis across species
Hassani-Pak, K., Singh, A., Brandizi, M., Hearnshaw, J., Parsons, J. D., Amberkar, S., Phillips, A. L., Doonan, J. H. & Rawlings, C., 24 Aug 2021, In: Plant Biotechnology Journal. 19, 8, p. 1670-1678 9 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile60 Citations (Scopus)154 Downloads (Pure) -
Total FLC transcript dynamics from divergent paralogue expression explains flowering diversity in Brassica napus
Calderwood, A., Lloyd, A., Hepworth, J., Tudor, E. H., Jones, D. M., Woodhouse, S., Bilham, L., Chinoy, C., Williams, K., Corke, F., Doonan, J. H., Ostergaard, L., Irwin, J. A., Wells, R. & Morris, R. J., 17 Feb 2021, In: New Phytologist. 229, 6, p. 3534-3548 15 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile34 Citations (Scopus)244 Downloads (Pure) -
Untargeted Metabolomic Profiling Reveals Variation in Metabolites Associated with Nutritional Values in Tef Accessions
Girija, A., Yadav, R., Corke, F., Doonan, J. & Mur, L. A. J., 01 Dec 2021, In: Plant Foods for Human Nutrition. 76, 4, p. 536-539 4 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile4 Citations (Scopus)112 Downloads (Pure) -
2019
Combining high-throughput micro-CT-RGB phenotyping and genome-wide association study to dissect the genetic architecture of tiller growth in rice
Wu, D., Guo, Z., Ye, J., Feng, H., Liu, J., Chen, G., Zheng, J., Yan, D., Yang, X., Xiong, X., Liu, Q., Niu, Z., Gay, A., Doonan, J., Xiong, L. & Yang, W., 07 Jan 2019, In: Journal of Experimental Botany. 70, 2, p. 545-561 17 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile65 Citations (Scopus)312 Downloads (Pure) -
2018
The anatomy of phenotype ontologies: principles, properties and applications
Gkoutos, G. V., Schofield, P. N. & Hoehndorf, R., 28 Sept 2018, In: Briefings in Bioinformatics. 19, 5, p. 1008-1021 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile59 Citations (Scopus)266 Downloads (Pure) -
2017
Integrating phenotype ontologies with PhenomeNET
Rodríguez-García, M. Á., Gkoutos, G., Schofield, P. N. & Hoehndorf, R., 19 Dec 2017, In: Journal of Biomedical Semantics. 8, 58.Research output: Contribution to journal › Article › peer-review
Open AccessFile22 Citations (Scopus)148 Downloads (Pure) -
Non-destructive, high-content analysis of wheat grain traits using X-ray micro computed tomography
Hughes, A., Askew, K. L., Scotson, C. P., Williams, K. S., Sauze, C., Corke, F., Doonan, J. & Nibau, C., 01 Nov 2017, In: Plant Methods. 13, 1, 16 p., 76.Research output: Contribution to journal › Article › peer-review
Open AccessFile75 Citations (Scopus)222 Downloads (Pure) -
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics
Cooper, L., Meier, A., Laporte, M.-A., Elser, J. L., Mungall, C., Sinn, B. T., Cabaliere, D., Carbon, S., Dunn, N. A., Smith, B., Qu, B., Preece, J., Zhang, E., Todorovic, S., Gkoutos, G., Doonan, J., Stevenson, D. W., Arnaud, E. & Jaiswal, P., 23 Nov 2017, In: Nucleic Acids Research. gkx1152.Research output: Contribution to journal › Article › peer-review
Open AccessFile137 Citations (Scopus)185 Downloads (Pure) -
2016
A new emphasis on root traits for perennial grass and legume varieties with environmental and ecological benefits
Marshall, A. H., Collins, R. P., Humphreys, M. W. & Scullion, J., 17 Feb 2016, In: Food and Energy Security. 5, 1, p. 26-39 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile47 Citations (Scopus)192 Downloads (Pure) -
Automated estimation of tiller number in wheat by ribbon detection
Boyle, R. D., Corke, F. M. K. & Doonan, J. H., Jul 2016, In: Machine Vision and Applications. 27, 5, p. 637-646 10 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile13 Citations (Scopus)302 Downloads (Pure) -
Latin America: A development pole for phenomics
Camargo-Rodriguez, A. & Lobos, G. A., 06 Dec 2016, In: Frontiers in Plant Science. 1729.Research output: Contribution to journal › Article › peer-review
Open AccessFile21 Citations (Scopus)238 Downloads (Pure) -
Linking dynamic phenotyping with metabolite analysis to study natural variation in drought responses of Brachypodium distachyon
Fisher, L., Han, J., Corke, F., Akinyemi, A., Didion, T., Nielsen, K. K., Doonan, J., Mur, L. & Bosch, M., 29 Nov 2016, In: Frontiers in Plant Science. 7, N/A, 15 p., 1751.Research output: Contribution to journal › Article › peer-review
Open AccessFile30 Citations (Scopus)199 Downloads (Pure) -
Phenomics analysis of drought responses in Miscanthus collected from different geographical locations
Malinowska, M., Donnison, I. & Robson, P., 16 Dec 2016, In: GCB Bioenergy. 9, 1, p. 78-91 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile27 Citations (Scopus)180 Downloads (Pure) -
The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants
Hoehndorf, R., Alshahrani, M., Gkoutos, G., Gosline, G., Groom, Q., Hamann, T., Kattge, J., Mota de Oliveria, S., Schmidt, M., Sierra, S., Smets, E., Vos, R. A. & Weiland, C., 14 Nov 2016, In: Journal of Biomedical Semantics. 65, 7.Research output: Contribution to journal › Article › peer-review
Open AccessFile33 Citations (Scopus)151 Downloads (Pure) -
Using AberOWL for fast and scalable reasoning over BioPortal ontologies
Slater, L., Gkoutos, G. V., Schofield, P. N. & Hoehndorf, R., 08 Aug 2016, In: Journal of Biomedical Semantics. 7, 1, 49.Research output: Contribution to journal › Article › peer-review
Open Access12 Citations (Scopus) -
2015
An ontology approach to comparative phenomics in plants
Oellrich, A., Walls, R. L., Cannon, E. K. S., Cannon, S. B., Cooper, L., Gardiner, J., Gkoutos, G. V., Harper, L., He, M., Hoehndorf, R., Jaiswal, P., Kalberer, S. R., Lloyd, J. P., Meinke, D., Menda, N., Moore, L., Nelson, R. T., Pujar, A., Lawrence, C. J. & Huala, E., 25 Feb 2015, In: Plant Methods. 11, 10, 11.Research output: Contribution to journal › Article › peer-review
Open AccessFile46 Citations (Scopus)172 Downloads (Pure) -
Automatic Estimation of Wheat Grain Morphometry from CT Data
Strange, H., Zwiggelaar, R., Sturrock, C., Mooney, S. & Doonan, J., 2015, In: Functional Plant Biology. 42, p. 452-459 8 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile27 Citations (Scopus)3492 Downloads (Pure) -
Finding Our Way through Phenotypes
Deans, A. R., Lewis, S. E., Huala, E., Anzaldo, S. S., Ashburner, M., Balhoff, J. P., Blackburn, D. C., Blake, J. A., Burleigh, J. G., Chanet, B., Cooper, L. D., Courtot, M., Csösz, S., Cui, H., Dahdul, W., Das, S., Dececchi, T. A., Dettai, A., Diogo, R. & Druzinsky, R. E. & 54 others, , 06 Jan 2015, In: PLoS Biology. 13, 1, 9 p., e1002033.Research output: Contribution to journal › Article › peer-review
Open AccessFile167 Citations (Scopus)139 Downloads (Pure) -
2014
Image based estimation of oat panicle development using local patterns
Boyle, R. D., Corke, F. & Howarth, C. J., 26 Nov 2014, In: Functional Plant Biology. 42, 5, p. 433-443Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Citations (Scopus)269 Downloads (Pure) -
Objective Definition of Rosette Shape Variation Using a Combined Computer Vision and Data Mining Approach
Camargo-Rodriguez, A., Papadopoulou, D., Spyropoulou, Z., Vlachonasios, K., Doonan, J. H., Gay, A. P. & Candela, H. (Editor), 07 May 2014, In: PLoS ONE. 9, 5, p. e96889 11 p., e96889.Research output: Contribution to journal › Article › peer-review
Open AccessFile29 Citations (Scopus)173 Downloads (Pure)