SeqInfo : Big Data Stringology Algorithms for 2nd and 3rd Generation Sequencing - Dr Jacqueline Daykin - EU/WG

Clare, Amanda (PI)

Department of Computer Science

Project: Externally funded research

Status	Finished
Effective start/end date	15 Jan 2018 → 07 Jan 2021

Funding

Welsh European Funding Office (80761-AU-137 (WEST)): £174,971.30

1 Conference Proceeding (Non-Journal item)
1 Article
1 Preprint

Heuristics for the Run-length Encoded Burrows-Wheeler Transform Alphabet Ordering Problem
Major, L., Clare, A., Daykin, J., Mora, B. & Zarges, C., 26 Jan 2024, arXiv, 32 p.
Research output: Working paper › Preprint

Open Access
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6 Downloads (Pure)
Computation of the suffix array, burrows-wheeler transform and FM-index in V-order
Daykin, J., Mhaskar, N. & Smyth, W. F., 03 Aug 2021, In: Theoretical Computer Science. 880, p. 82-96 15 p.
Research output: Contribution to journal › Article › peer-review

Open Access
File
3 Citations (Scopus)

103 Downloads (Pure)
Evaluation of a Permutation-Based Evolutionary Framework for Lyndon Factorizations
Major, L., Clare, A., Daykin, J., Mora, B., Peña Gamboa, L. & Zarges, C., 31 Aug 2020, Parallel Problem Solving from Nature – PPSN XVI - 16th International Conference, PPSN 2020, Proceedings: 16th International Conference, Leiden, The Netherlands, September 5-9, 2020, Proceedings. Bäck, T., Preuss, M., Deutz, A., Emmerich, M., Wang, H., Doerr, C. & Trautmann, H. (eds.). Springer Nature, p. 390-403 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12269 LNCS).
Research output: Chapter in Book/Report/Conference proceeding › Conference Proceeding (Non-Journal item)

Open Access
File
3 Citations (Scopus)

189 Downloads (Pure)