Assessment of physical and hydrological properties of biological soil crusts using X-ray microtomography and modeling

M. Menon, Q. Yuan, X. Jia, A. J. Dougill, S. R. Hoon, Andrew David Thomas, R. A. Williams

Research output: Contribution to journalArticlepeer-review

62 Citations (SciVal)
239 Downloads (Pure)


Biological soil crusts (BSCs) are formed by aggregates of soil particles and communities of microbial organisms and are common in all drylands. The role of BSCs on infiltration remains uncertain due to the lack of data on their role in affecting soil physical properties such as porosity and structure. Quantitative assessment of these properties is primarily hindered by the fragile nature of the crusts. Here we show how the use of a combination of non-destructive imaging X-ray microtomography (XMT) and Lattice Boltzmann method (LBM) enables quantification of key soil physical parameters and the modeling of water flow through BSCs samples from Kalahari Sands, Botswana. We quantify porosity and flow changes as a result of mechanical disturbance of such a fragile cyanobacteria-dominated crust. Results show significant variations in porosity between different types of crusts and how they affect the flow and that disturbance of a cyanobacteria-dominated crust results in the breakdown of larger pore spaces and reduces flow rates through the surface layer. We conclude that the XMT–LBM approach is well suited for study of fragile surface crust samples where physical and hydraulic properties cannot be easily quantified using conventional methods.
Original languageEnglish
Pages (from-to)47-54
JournalJournal of Hydrology
Issue number1-2
Early online date27 Nov 2010
Publication statusPublished - 24 Jan 2011


  • biological soil crusts
  • porosity
  • superficial velocity
  • x-ray microtomography
  • lattice Boltzmann
  • Kalahari


Dive into the research topics of 'Assessment of physical and hydrological properties of biological soil crusts using X-ray microtomography and modeling'. Together they form a unique fingerprint.

Cite this