TY - JOUR
T1 - Computational Infrared Spectroscopy of 958 Phosphorus-Bearing Molecules
AU - C. Zapata Trujillo, Juan
AU - Syme, Anna-Maree
AU - Rowell, Keiran
AU - Burns, Brendan
AU - Clark, Ebubekir
AU - Gorman, Maire
AU - Jacob, Lorrie
AU - Kapodistrias, Panayioti
AU - Kedziora, David
AU - Lempriere, Felix
AU - Medcraft, Chris
AU - O'Sullivan, Jensen
AU - Robertson, Evan
AU - Soares, George
AU - Steller, Luke
AU - Teece, Bronwyn
AU - Tremblay, Chenoa
AU - Sousa-Silva, Clara
AU - McKemmish, Laura K.
N1 - KR was supported from a grant by the Australian Research Council (DP160101792).
The authors thank to Maria Cunningham, Maria Paula Pérez-Peña, and Max Litherland for their enthusiastic participation in the hackathon that started this project.
LM would also like to thank her awesome colleagues for the writing groups and active encouragement that fast-tracked this paper to submission in the difficult 2020 year.
This research was undertaken with the assistance of resources from the National Computational Infrastructure (NCI Australia), an NCRIS enabled capability supported by the Australian Government.
PY - 2021/4/8
Y1 - 2021/4/8
N2 - Phosphine is now well-established as a biosignature, which has risen to prominence with its recent tentative detection on Venus. To follow up this discovery and related future exoplanet biosignature detections, it is important to spectroscopically detect the presence of phosphorus-bearing atmospheric molecules that could be involved in the chemical networks producing, destroying or reacting with phosphine. We start by enumerating phosphorus-bearing molecules (P-molecules) that could potentially be detected spectroscopically in planetary atmospheres and collecting all available spectral data. Gaseous P-molecules are rare, with speciation information scarce. Very few molecules have high accuracy spectral data from experiment or theory; instead, the best current spectral data was obtained using a high-throughput computational algorithm, RASCALL, relying on functional group theory to efficiently produce approximate spectral data for arbitrary molecules based on their component functional groups. Here, we present a high-throughput approach utilizing established computational quantum chemistry methods (CQC) to produce a database of approximate infrared spectra for 958 P-molecules. These data are of interest for astronomy and astrochemistry (importantly identifying potential ambiguities in molecular assignments), improving RASCALL's underlying data, big data spectral analysis and future machine learning applications. However, this data will probably not be sufficiently accurate for secure experimental detections of specific molecules within complex gaseous mixtures in laboratory or astronomy settings. We chose the strongly performing harmonic ωB97X-D/def2-SVPD model chemistry for all molecules and test the more sophisticated and time-consuming GVPT2 anharmonic model chemistry for 250 smaller molecules. Limitations to our automated approach, particularly for the less robust GVPT2 method, are considered along with pathways to future improvements. Our CQC calculations significantly improve on existing RASCALL data by providing quantitative intensities, new data in the fingerprint region (crucial for molecular identification) and higher frequency regions (overtones, combination bands), and improved data for fundamental transitions based on the specific chemical environment. As the spectroscopy of most P-molecules have never been studied outside RASCALL and this approach, the new data in this paper is the most accurate spectral data available for most P-molecules and represent a significant advance in the understanding of the spectroscopic behavior of these molecules.
AB - Phosphine is now well-established as a biosignature, which has risen to prominence with its recent tentative detection on Venus. To follow up this discovery and related future exoplanet biosignature detections, it is important to spectroscopically detect the presence of phosphorus-bearing atmospheric molecules that could be involved in the chemical networks producing, destroying or reacting with phosphine. We start by enumerating phosphorus-bearing molecules (P-molecules) that could potentially be detected spectroscopically in planetary atmospheres and collecting all available spectral data. Gaseous P-molecules are rare, with speciation information scarce. Very few molecules have high accuracy spectral data from experiment or theory; instead, the best current spectral data was obtained using a high-throughput computational algorithm, RASCALL, relying on functional group theory to efficiently produce approximate spectral data for arbitrary molecules based on their component functional groups. Here, we present a high-throughput approach utilizing established computational quantum chemistry methods (CQC) to produce a database of approximate infrared spectra for 958 P-molecules. These data are of interest for astronomy and astrochemistry (importantly identifying potential ambiguities in molecular assignments), improving RASCALL's underlying data, big data spectral analysis and future machine learning applications. However, this data will probably not be sufficiently accurate for secure experimental detections of specific molecules within complex gaseous mixtures in laboratory or astronomy settings. We chose the strongly performing harmonic ωB97X-D/def2-SVPD model chemistry for all molecules and test the more sophisticated and time-consuming GVPT2 anharmonic model chemistry for 250 smaller molecules. Limitations to our automated approach, particularly for the less robust GVPT2 method, are considered along with pathways to future improvements. Our CQC calculations significantly improve on existing RASCALL data by providing quantitative intensities, new data in the fingerprint region (crucial for molecular identification) and higher frequency regions (overtones, combination bands), and improved data for fundamental transitions based on the specific chemical environment. As the spectroscopy of most P-molecules have never been studied outside RASCALL and this approach, the new data in this paper is the most accurate spectral data available for most P-molecules and represent a significant advance in the understanding of the spectroscopic behavior of these molecules.
KW - Venus
KW - astrophysical spectroscopy
KW - exoplanetary atmospheres
KW - infrared spectra
KW - phosphine
KW - phosphorus-bearing molecules
KW - quantum chemistry ab initio
KW - spectral data
UR - http://www.scopus.com/inward/record.url?scp=85109977528&partnerID=8YFLogxK
U2 - 10.3389/fspas.2021.639068
DO - 10.3389/fspas.2021.639068
M3 - Article
SN - 2296-987X
VL - 8
JO - Frontiers in Astronomy and Space Sciences
JF - Frontiers in Astronomy and Space Sciences
M1 - 639068
ER -