MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB

T. F. Rayner; F .I. Rezwan; Margus Lukk; Xiangqun Zheng Bradley; Anne Farne; Ele Holloway; James Malone; Eleanor Williams; Helen Parkinson

doi:10.1093/bioinformatics/btn617

MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB

T. F. Rayner
, F .I. Rezwan
, Margus Lukk
, Xiangqun Zheng Bradley
, Anne Farne
, Ele Holloway
, James Malone
, Eleanor Williams
, Helen Parkinson

Department of Computer Science

University of Hertfordshire

Research output: Contribution to journal › Article › peer-review

15 Citations (Scopus)

Abstract

The MAGE-TAB format for microarray data representation and exchange has been proposed by the microarray community to replace the more complex MAGE-ML format. We present a suite of tools to support MAGE-TAB generation and validation, conversion between existing formats for data exchange, visualization of the experiment designs encoded by MAGE-TAB documents and the mining of such documents for semantic content.

Original language	English
Pages (from-to)	279-280
Number of pages	2
Journal	Bioinformatics
Volume	25
Issue number	2
DOIs	https://doi.org/10.1093/bioinformatics/btn617
Publication status	Published - 15 Jan 2009

Keywords

Algorithms
Databases, Genetic
Gene Expression Profiling
Information Storage and Retrieval/methods
Oligonucleotide Array Sequence Analysis/methods
Software
Software Validation

Access to Document

10.1093/bioinformatics/btn617

Permanent link

Persistent link

Cite this

@article{93fcf7368b9a4599b49c97b450f16897,

title = "MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB",

abstract = "The MAGE-TAB format for microarray data representation and exchange has been proposed by the microarray community to replace the more complex MAGE-ML format. We present a suite of tools to support MAGE-TAB generation and validation, conversion between existing formats for data exchange, visualization of the experiment designs encoded by MAGE-TAB documents and the mining of such documents for semantic content.",

keywords = "Algorithms, Databases, Genetic, Gene Expression Profiling, Information Storage and Retrieval/methods, Oligonucleotide Array Sequence Analysis/methods, Software, Software Validation",

author = "Rayner, \{T. F.\} and Rezwan, \{F .I.\} and Margus Lukk and Bradley, \{Xiangqun Zheng\} and Anne Farne and Ele Holloway and James Malone and Eleanor Williams and Helen Parkinson",

year = "2009",

month = jan,

day = "15",

doi = "10.1093/bioinformatics/btn617",

language = "English",

volume = "25",

pages = "279--280",

journal = "Bioinformatics",

issn = "1367-4803",

publisher = "Oxford University Press",

number = "2",

}

TY - JOUR

T1 - MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB

AU - Rayner, T. F.

AU - Rezwan, F .I.

AU - Lukk, Margus

AU - Bradley, Xiangqun Zheng

AU - Farne, Anne

AU - Holloway, Ele

AU - Malone, James

AU - Williams, Eleanor

AU - Parkinson, Helen

PY - 2009/1/15

Y1 - 2009/1/15

N2 - The MAGE-TAB format for microarray data representation and exchange has been proposed by the microarray community to replace the more complex MAGE-ML format. We present a suite of tools to support MAGE-TAB generation and validation, conversion between existing formats for data exchange, visualization of the experiment designs encoded by MAGE-TAB documents and the mining of such documents for semantic content.

AB - The MAGE-TAB format for microarray data representation and exchange has been proposed by the microarray community to replace the more complex MAGE-ML format. We present a suite of tools to support MAGE-TAB generation and validation, conversion between existing formats for data exchange, visualization of the experiment designs encoded by MAGE-TAB documents and the mining of such documents for semantic content.

KW - Algorithms

KW - Databases, Genetic

KW - Gene Expression Profiling

KW - Information Storage and Retrieval/methods

KW - Oligonucleotide Array Sequence Analysis/methods

KW - Software

KW - Software Validation

UR - https://www.scopus.com/pages/publications/58349107900

U2 - 10.1093/bioinformatics/btn617

DO - 10.1093/bioinformatics/btn617

M3 - Article

C2 - 19038988

SN - 1367-4803

VL - 25

SP - 279

EP - 280

JO - Bioinformatics

JF - Bioinformatics

IS - 2

ER -

MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB

Abstract

Keywords

Access to Document

Permanent link

Other files and links

Fingerprint

Cite this