The 3' Untranslated Region of Messages in the Rumen Protozoan Entodinium caudatum

N. R. McEwan; Sylvain C. P. Eschenlauer; Roger E. Calza; R. John Wallace; C. J. Newbold

doi:10.1078/1434-4610-00014

The 3' Untranslated Region of Messages in the Rumen Protozoan Entodinium caudatum

N. R. McEwan, Sylvain C. P. Eschenlauer, Roger E. Calza, R. John Wallace, C. J. Newbold

Institute of Biological, Environmental, and Rural Sciences

Research output: Contribution to journal › Article › peer-review

10 Citations (Scopus)

Abstract

The 3' untranslated regions of a number of cDNAs from the rumen protozoal species Entodinium caudatum were studied with a view to characterising their preference for stop codons, general length, nucleotide composition and polyadenylation signals. Unlike a number of ciliates, Entodinium caudatum uses UAA as a stop codon, rather than as a codon for glutamine. In addition, the 3' untranslated region of the message is generally less than 100 nucleotides in length, extremely A+T rich, and does not appear to utilise any of the conventional polyadenylation signals described in other organisms.

Original language	English
Pages (from-to)	139-146
Number of pages	8
Journal	Protist
Volume	151
Issue number	2
DOIs	https://doi.org/10.1078/1434-4610-00014
Publication status	Published - Aug 2000

Keywords

POLYADENYLATION
MESSENGER-RNA
GENETIC-CODE
CILIATE PROTOZOAN
POINT MUTATIONS
EUPLOTES-OCTOCARINATUS
EFFICIENCY
BIAS
SITES
CODON USAGE

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title = "The 3' Untranslated Region of Messages in the Rumen Protozoan Entodinium caudatum",

abstract = "The 3' untranslated regions of a number of cDNAs from the rumen protozoal species Entodinium caudatum were studied with a view to characterising their preference for stop codons, general length, nucleotide composition and polyadenylation signals. Unlike a number of ciliates, Entodinium caudatum uses UAA as a stop codon, rather than as a codon for glutamine. In addition, the 3' untranslated region of the message is generally less than 100 nucleotides in length, extremely A+T rich, and does not appear to utilise any of the conventional polyadenylation signals described in other organisms.",

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note = "McEwan, N. R., Eschenlauer, S. C. P., Calza, R. E., Wallace, R. J., Newbold, C. J. (2000). The 3' Untranslated Region of Messages in the Rumen Protozoan Entodinium caudatum. Protist, 151 (2), 139-146.",

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T1 - The 3' Untranslated Region of Messages in the Rumen Protozoan Entodinium caudatum

AU - McEwan, N. R.

AU - Eschenlauer, Sylvain C. P.

AU - Calza, Roger E.

AU - Wallace, R. John

AU - Newbold, C. J.

N1 - McEwan, N. R., Eschenlauer, S. C. P., Calza, R. E., Wallace, R. J., Newbold, C. J. (2000). The 3' Untranslated Region of Messages in the Rumen Protozoan Entodinium caudatum. Protist, 151 (2), 139-146.

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N2 - The 3' untranslated regions of a number of cDNAs from the rumen protozoal species Entodinium caudatum were studied with a view to characterising their preference for stop codons, general length, nucleotide composition and polyadenylation signals. Unlike a number of ciliates, Entodinium caudatum uses UAA as a stop codon, rather than as a codon for glutamine. In addition, the 3' untranslated region of the message is generally less than 100 nucleotides in length, extremely A+T rich, and does not appear to utilise any of the conventional polyadenylation signals described in other organisms.

AB - The 3' untranslated regions of a number of cDNAs from the rumen protozoal species Entodinium caudatum were studied with a view to characterising their preference for stop codons, general length, nucleotide composition and polyadenylation signals. Unlike a number of ciliates, Entodinium caudatum uses UAA as a stop codon, rather than as a codon for glutamine. In addition, the 3' untranslated region of the message is generally less than 100 nucleotides in length, extremely A+T rich, and does not appear to utilise any of the conventional polyadenylation signals described in other organisms.

KW - POLYADENYLATION

KW - MESSENGER-RNA

KW - GENETIC-CODE

KW - CILIATE PROTOZOAN

KW - POINT MUTATIONS

KW - EUPLOTES-OCTOCARINATUS

KW - EFFICIENCY

KW - BIAS

KW - SITES

KW - CODON USAGE

UR - https://www.scopus.com/pages/publications/0033841649

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DO - 10.1078/1434-4610-00014

M3 - Article

SN - 1434-4610

VL - 151

SP - 139

EP - 146

JO - Protist

JF - Protist

IS - 2

ER -

The 3' Untranslated Region of Messages in the Rumen Protozoan Entodinium caudatum

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Keywords

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